top of page

Journal Articles

Google Scholar
ORCiD
PubMed
    ​

  1. ​Mathur, D., Thakur, M., Díaz, S.A., Susumu, K., Stewart, M.H., Oh, E., Walper, S.A., Medintz, I.L., Hybrid Nucleic Acid-Quantum Dot Assemblies as Multiplexed Reporter Platforms for Cell-Free Transcription Translation-Based Biosensors. ACS Synthetic Biology 2022 DOI: 10.1021/acssynbio.2c00394. Journal Cover.

  2. Huff, J.S., Díaz, S.A., Barclay, M.S., Chowdhury, A.U., Chiriboga, M., Ellis, G.A., Mathur, D., Patten, L.K., Roy, S.K., Sup, A., Biaggne, A., Rolczynski, B.S., Cunningham, P.D., Li, L., Lee, J., Davis, P.H., Yurke, B., Knowlton, W.B., Medintz, I.L., Turner, D.B., Melinger, J.S., Pensack, R.D., Tunable Electronic Structure via DNA-Templated Heteroaggregates of Two Distinct Cyanine Dyes. The Journal of Physical Chemistry C 2022 DOI: 10.1021/acs.jpcc.2c04336.

  3. Mathur, D., Rogers, K.E., Díaz, S.A., Muroski, M.E., Klein, W.P., Nag, O.K., Lee, K., Field, L.D., Delehanty, J.B., Medintz, I.L., Determining the Cytosolic Stability of Small DNA Nanostructures in Cellula. Nano Letters 2022 DOI: 10.1021/acs.nanolett.2c00917. Impact Factor: 11.19. Journal Cover.

  4. Chowdhury, A.U., Díaz, S.A., Huff, J.S., Barclay, M.S., Chiriboga, M., Ellis, G.A., Mathur, D., Patten, L.K., Sup, A., Hallstrom, N., Cunningham, P.D., Lee, J., Davis, P.H., Turner, D.B., Yurke, B., Knowlton, W.B., Medintz, I.L., Melinger, J.S., Pensack, R.P., Tuning between Quenching and Energy Transfer in DNATemplated Heterodimer Aggregates. The Journal of Physical Chemistry Letters 2022 DOI:10.1021/acs.jpclett.2c00017. IF: 6.475.

  5. Meares, A., Susumu, K., Mathur, D., Lee, S.H., Mass, O.A., Lee, J., Pensack, R.D., Yurke, B., Knowlton, W.B., Melinger, J.S., Medintz, I.L., Synthesis of Substituted Cy5 Phosphoramidite Derivatives and Their Incorporation into Oligonucleotides Using Automated DNA Synthesis. ACS Omega 2022 DOI:10.1021/acsomega.1c06921. IF: 3.512.

  6. Chiriboga, M.C., Green, C.M., Hastman, D.A., Mathur, D., Wei, Q., Díaz, S.A., Medintz, I.L., Veneziano, R., Rapid DNA origami nanostructure detection and classification using the YOLOv5 deep convolutional neural network. Scientific Reports 2021 DOI:10.1038/s41598-022-07759-3. IF: 4.379.

  7. Chiriboga, M.C., Díaz, S.A., Mathur, D., Hastman, D.A., Melinger, J.S., Veneziano, R., Medintz, I.L., Understanding Self-Assembled Pseudoisocyanine Dye Aggregates in DNA Nanostructures and Their Exciton Relay Transfer Capabilities. The Journal of Physical Chemistry B 2021 DOI:10.1021/acs.jpcb.1c09048. IF: 2.991. Journal Cover.

  8. Mathur, D.*; Samanta, A.*; Ancona, M.*; Díaz, S.A.; Kim, Y.C.; Melinger, J.S.; Goldman, E.R.; Sadowski, J.P.; Ong, L.L.; Yin, P.; Medintz, I.L., Understanding Förster Resonance Energy Transfer in the Sheet Regime with DNA Brick-Based Dye Networks. ACS Nano 2021, 15 (10), 16452–16468. IF: 15.88. *Equal contribution.

  9. Cunningham, P. D.*; Spillmann, C. M.*; Melinger, J. S.; Ancona, M. G.; Kim, Y. C.; Mathur, D.; Buckhout-White, S.; Goldman, E. R.; Medintz, I. L., Förster Resonance Energy Transfer in Linear DNA Multifluorophore Photonic Wires: Comparing Dual versus Split Rail Building Block Designs. Advancd Optical Materials 2021, 9, 2100884. IF: 9.9. *Equal contribution. Journal Cover.

  10. Green, C. M.*; Hastman, D. A.*; Mathur, D.; Susumu, K.; Oh, E.; Medintz, I. L.; Díaz, S. A., Direct and Efficient Conjugation of Quantum Dots to DNA Nanostructures with Peptide-PNA. ACS Nano 2021, 15 (5), 9101-9110. IF: 15.88. *Equal contribution.

  11. Mathur, D.; Kim, Y. C.; Díaz, S. A.; Cunningham, P. D.; Rolczynski, B. S.; Ancona, M. G.; Medintz, I. L.; Melinger, J. S., Can a DNA Origami Structure Constrain the Position and Orientation of an Attached Dye Molecule? The Journal of Physical Chemistry C 2021, 125 (2), 1509-1522. IF: 4.1. Journal Cover.

  12. Hastman, D. A.; Melinger, J. S.; Aragones, G. L.; Cunningham, P. D.; Chiriboga, M.; Salvato, Z. J.; Salvato, T. M.; Brown, C. W., 3rd; Mathur, D.; Medintz, I. L.; Díaz, S.A., Femtosecond Laser Pulse Excitation of DNA-Labeled Gold Nanoparticles: Establishing a Quantitative Local Nanothermometer for Biological Applications. ACS Nano 2020, 14 (7), 8570-8583. IF: 15.88.

  13. Mazuski, R. J.; Díaz, S. A.; Wood, R. E.; Lloyd, L. T.; Klein, W. P.; Mathur, D.; Melinger, J. S.; Engel, G. S.; Medintz, I. L., Ultrafast Excitation Transfer in Cy5 DNA Photonic Wires Displays Dye Conjugation and Excitation Energy Dependency. The Journal of Physical Chemistry Letters 2020, 11 (10), 4163-4172. IF: 6.71.

  14. Brintlinger, T. H.; Buckhout-White, S.; Bassim, N. D.; Mathur, D.; Samanta, A.; Robinson, J. T.; Idrobo, J.-C.; Stroud, R. M.; Goldman, E. R.; Ancona, M. G., Chemical Mapping of Unstained DNA Origami Using STEM/EDS and Graphene Supports. ACS Applied Nano Materials 2020, 3 (2), 1123-1130. IF: 3.9.

  15. Green, C. M.; Mathur, D.; Medintz, I. L., Understanding the Fate of DNA Nanostructures inside the Cell. The Journal of Materials Chemistry B 2020, 8 (29), 6170-6178. IF: 5.0. Journal Cover.

  16. Mathur, D.*; Klein, W. P.*; Chiriboga, M.; Bui, H.; Oh, E.; Nita, R.; Naciri, J.; Johns, P.; Fontana, J.; Díaz, S. A., et al., Analyzing Fidelity and Reproducibility of DNA Templated Plasmonic Nanostructures. Nanoscale 2019, 11 (43), 20693-20706. IF: 6.8. *Equal contribution.

  17. Mathur, D.; Medintz, I. L., The Growing Development of DNA Nanostructures for Potential Healthcare- Related Applications. Advanced Healthcare Materials 2019, 8 (9), e1801546. IF: 7.3. Journal Cover.

  18. Cunningham, P. D.; Kim, Y. C.; Díaz, S. A.; Buckhout-White, S.; Mathur, D.; Medintz, I. L.; Melinger, J. S., Optical Properties of Vibronically Coupled Cy3 Dimers on DNA Scaffolds. The Journal of Physical Chemistry B 2018, 122 (19), 5020-5029. IF: 2.8.

  19. Toeppa, A.J.; Schauta, R.G.; Scotta, B.D.; Mathur, D.; Berens, A.J.; Petersen, C.A., Leishmania Incidence and Prevalence in U.S. Hunting Hounds Maintained via Vertical Transmission. Veterinary Parasitology: Regional Studies and Reports 2017, 10, 75-81. IF: 1.73.

  20. Mathur, D.*; Samanta, A.*; Oh, E.; Díaz, S. A.; Susumu, K.; Ancona, M. G.; Medintz, I. L., Quantum Dot Encapsulation Using a Peptide-Modified Tetrahedral DNA Cage. Chemistry of Materials 2017, 29 (14), 5762-5766. IF: 9.5. *Equal contribution.

  21. Mathur, D.; Medintz, I. L., Analyzing DNA Nanotechnology: A Call to Arms for the Analytical Chemistry Community. Analytical Chemistry 2017, 89 (5), 2646-2663. IF: 6.7. Journal Cover.

  22. Mathur, D.; Henderson, E. R., Programmable DNA Nanosystem for Molecular Interrogation. Scientific Reports 2016, 6, 27413. IF: 3.9.

  23. Mathur, D.; Henderson, E. R., Complex DNA Nanostructures from Oligonucleotide Ensembles. ACS Synthetic Biology 2012, 2 (4), 180 - 185. IF: 5.5.

bottom of page